Cluster: HRGMv2_0015_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0015
- CGC Family ID: CGCFAM_00744
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0015_70 | HRGMv2_0015_70_3 | 1687 | 2412 | - | 3.A.1.3.15 |
| TC | HRGMv2_0015_70 | HRGMv2_0015_70_4 | 2405 | 3061 | - | 3.A.1.3.15 |
| TC | HRGMv2_0015_70 | HRGMv2_0015_70_5 | 3086 | 3919 | - | 3.A.1.3.27 |
| CAZyme | HRGMv2_0015_70 | HRGMv2_0015_70_6 | 3946 | 4779 | - | CE4 |
| CAZyme | HRGMv2_0015_70 | HRGMv2_0015_70_7 | 4776 | 5642 | - | CE4 |
Gene ID: HRGMv2_0015_70_3
Type: TC
Location: 1687 - 2412 (-)
Type: TC
Location: 1687 - 2412 (-)
Gene ID: HRGMv2_0015_70_4
Type: TC
Location: 2405 - 3061 (-)
Type: TC
Location: 2405 - 3061 (-)
Gene ID: HRGMv2_0015_70_5
Type: TC
Location: 3086 - 3919 (-)
Type: TC
Location: 3086 - 3919 (-)
Gene ID: HRGMv2_0015_70_6
Type: CAZyme
Location: 3946 - 4779 (-)
Type: CAZyme
Location: 3946 - 4779 (-)
Gene ID: HRGMv2_0015_70_7
Type: CAZyme
Location: 4776 - 5642 (-)
Type: CAZyme
Location: 4776 - 5642 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.