Cluster: HRGMv2_0015_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0015
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0015_27 | HRGMv2_0015_27_9 | 11492 | 12829 | + | CE11 |
| pfam | HRGMv2_0015_27 | HRGMv2_0015_27_10 | 12845 | 13654 | + | Hexapep | Hexapep | Acetyltransf_11 |
| pfam | HRGMv2_0015_27 | HRGMv2_0015_27_11 | 13661 | 14485 | + | LpxI_C | LpxI_N |
| CAZyme | HRGMv2_0015_27 | HRGMv2_0015_27_12 | 14764 | 15900 | + | GT19 |
| TC | HRGMv2_0015_27 | HRGMv2_0015_27_13 | 15897 | 17663 | + | 3.A.1.106.3 |
| CAZyme | HRGMv2_0015_27 | HRGMv2_0015_27_14 | 17724 | 20255 | + | GT30 |
Gene ID: HRGMv2_0015_27_9
Type: CAZyme
Location: 11492 - 12829 (+)
Type: CAZyme
Location: 11492 - 12829 (+)
Gene ID: HRGMv2_0015_27_10
Type: pfam
Location: 12845 - 13654 (+)
Type: pfam
Location: 12845 - 13654 (+)
Gene ID: HRGMv2_0015_27_11
Type: pfam
Location: 13661 - 14485 (+)
Type: pfam
Location: 13661 - 14485 (+)
Gene ID: HRGMv2_0015_27_12
Type: CAZyme
Location: 14764 - 15900 (+)
Type: CAZyme
Location: 14764 - 15900 (+)
Gene ID: HRGMv2_0015_27_13
Type: TC
Location: 15897 - 17663 (+)
Type: TC
Location: 15897 - 17663 (+)
Gene ID: HRGMv2_0015_27_14
Type: CAZyme
Location: 17724 - 20255 (+)
Type: CAZyme
Location: 17724 - 20255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.