dbCAN Logo

Cluster: HRGMv2_0015_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0015_12 HRGMv2_0015_12_25 25619 26923 + 2.A.3.3.16
pfam HRGMv2_0015_12 HRGMv2_0015_12_26 26951 28072 + Radical_SAM
pfam HRGMv2_0015_12 HRGMv2_0015_12_27 28611 29732 + Meth_synt_2
CAZyme HRGMv2_0015_12 HRGMv2_0015_12_28 30018 31433 - AA4
NULL(UNKNOWN) HRGMv2_0015_12 HRGMv2_0015_12_29 31778 33466 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0015_12 HRGMv2_0015_12_30 33574 34734 + 2.A.6.2.19
TC HRGMv2_0015_12 HRGMv2_0015_12_31 34748 37897 + 2.A.6.2.14
TC HRGMv2_0015_12 HRGMv2_0015_12_32 38025 39764 + 3.A.1.203.11
TC HRGMv2_0015_12 HRGMv2_0015_12_33 39798 41162 + 2.A.25.1.4
Gene ID: HRGMv2_0015_12_25
Type: TC
Location: 25619 - 26923 (+)
Gene ID: HRGMv2_0015_12_26
Type: pfam
Location: 26951 - 28072 (+)
Gene ID: HRGMv2_0015_12_27
Type: pfam
Location: 28611 - 29732 (+)
Gene ID: HRGMv2_0015_12_28
Type: CAZyme
Location: 30018 - 31433 (-)
Gene ID: HRGMv2_0015_12_29
Type:
Location: 31778 - 33466 (+)
Gene ID: HRGMv2_0015_12_30
Type: TC
Location: 33574 - 34734 (+)
Gene ID: HRGMv2_0015_12_31
Type: TC
Location: 34748 - 37897 (+)
Gene ID: HRGMv2_0015_12_32
Type: TC
Location: 38025 - 39764 (+)
Gene ID: HRGMv2_0015_12_33
Type: TC
Location: 39798 - 41162 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List