Cluster: HRGMv2_0014_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0014
- CGC Family ID: CGCFAM_05934
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0014_11 | HRGMv2_0014_11_1 | 69 | 1172 | + | GH3 |
| pfam | HRGMv2_0014_11 | HRGMv2_0014_11_2 | 1363 | 2016 | + | Amidase_2 |
| peptidase | HRGMv2_0014_11 | HRGMv2_0014_11_3 | 2277 | 3650 | + | M18.UPW |
| TC | HRGMv2_0014_11 | HRGMv2_0014_11_4 | 3818 | 4042 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_0014_11_1
Type: CAZyme
Location: 69 - 1172 (+)
Type: CAZyme
Location: 69 - 1172 (+)
Gene ID: HRGMv2_0014_11_2
Type: pfam
Location: 1363 - 2016 (+)
Type: pfam
Location: 1363 - 2016 (+)
Gene ID: HRGMv2_0014_11_3
Type: peptidase
Location: 2277 - 3650 (+)
Type: peptidase
Location: 2277 - 3650 (+)
Gene ID: HRGMv2_0014_11_4
Type: TC
Location: 3818 - 4042 (+)
Type: TC
Location: 3818 - 4042 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp900770265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0014_11_3 | vegetarian > omnivore | 1.37395 | 0.02258 |