Cluster: HRGMv2_0014_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0014
- CGC Family ID: CGCFAM_02305
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0014_6 | HRGMv2_0014_6_23 | 24187 | 26718 | - | GT30 |
| TC | HRGMv2_0014_6 | HRGMv2_0014_6_24 | 26778 | 28544 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_0014_6 | HRGMv2_0014_6_25 | 28541 | 29677 | - | GT19 |
| pfam | HRGMv2_0014_6 | HRGMv2_0014_6_26 | 29981 | 30811 | - | LpxI_C | LpxI_N |
| pfam | HRGMv2_0014_6 | HRGMv2_0014_6_27 | 30818 | 31627 | - | Hexapep | Hexapep | Acetyltransf_11 |
| CAZyme | HRGMv2_0014_6 | HRGMv2_0014_6_28 | 31643 | 32980 | - | CE11 |
Gene ID: HRGMv2_0014_6_23
Type: CAZyme
Location: 24187 - 26718 (-)
Type: CAZyme
Location: 24187 - 26718 (-)
Gene ID: HRGMv2_0014_6_24
Type: TC
Location: 26778 - 28544 (-)
Type: TC
Location: 26778 - 28544 (-)
Gene ID: HRGMv2_0014_6_25
Type: CAZyme
Location: 28541 - 29677 (-)
Type: CAZyme
Location: 28541 - 29677 (-)
Gene ID: HRGMv2_0014_6_26
Type: pfam
Location: 29981 - 30811 (-)
Type: pfam
Location: 29981 - 30811 (-)
Gene ID: HRGMv2_0014_6_27
Type: pfam
Location: 30818 - 31627 (-)
Type: pfam
Location: 30818 - 31627 (-)
Gene ID: HRGMv2_0014_6_28
Type: CAZyme
Location: 31643 - 32980 (-)
Type: CAZyme
Location: 31643 - 32980 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp900770265
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.