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Cluster: HRGMv2_0014_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0014_2 HRGMv2_0014_2_85 97869 99233 - 2.A.25.1.4
TC HRGMv2_0014_2 HRGMv2_0014_2_86 99267 101006 - 3.A.1.203.11
TC HRGMv2_0014_2 HRGMv2_0014_2_87 101281 104430 - 2.A.6.2.14
TC HRGMv2_0014_2 HRGMv2_0014_2_88 104444 105604 - 2.A.6.2.4
NULL(UNKNOWN) HRGMv2_0014_2 HRGMv2_0014_2_89 105712 107388 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0014_2 HRGMv2_0014_2_90 107733 109148 + AA4
pfam HRGMv2_0014_2 HRGMv2_0014_2_91 109335 110456 - Meth_synt_2
pfam HRGMv2_0014_2 HRGMv2_0014_2_92 110631 111752 - Radical_SAM
TC HRGMv2_0014_2 HRGMv2_0014_2_93 112058 113362 - 2.A.3.3.16
Gene ID: HRGMv2_0014_2_85
Type: TC
Location: 97869 - 99233 (-)
Gene ID: HRGMv2_0014_2_86
Type: TC
Location: 99267 - 101006 (-)
Gene ID: HRGMv2_0014_2_87
Type: TC
Location: 101281 - 104430 (-)
Gene ID: HRGMv2_0014_2_88
Type: TC
Location: 104444 - 105604 (-)
Gene ID: HRGMv2_0014_2_89
Type:
Location: 105712 - 107388 (-)
Gene ID: HRGMv2_0014_2_90
Type: CAZyme
Location: 107733 - 109148 (+)
Gene ID: HRGMv2_0014_2_91
Type: pfam
Location: 109335 - 110456 (-)
Gene ID: HRGMv2_0014_2_92
Type: pfam
Location: 110631 - 111752 (-)
Gene ID: HRGMv2_0014_2_93
Type: TC
Location: 112058 - 113362 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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