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Cluster: HRGMv2_0014_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0014_22 HRGMv2_0014_22_4 7653 9065 + 2.A.47.3.1
pfam HRGMv2_0014_22 HRGMv2_0014_22_5 9152 10612 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam HRGMv2_0014_22 HRGMv2_0014_22_6 10788 11291 + Cupin_2
TC HRGMv2_0014_22 HRGMv2_0014_22_7 11720 13078 + 3.B.1.1.6
CAZyme HRGMv2_0014_22 HRGMv2_0014_22_8 13190 15256 - GT51
pfam HRGMv2_0014_22 HRGMv2_0014_22_9 15624 16142 + GreA_GreB | GreA_GreB_N
pfam HRGMv2_0014_22 HRGMv2_0014_22_10 16170 18158 + tRNA-synt_2 | tRNA_anti-codon | tRNA_bind
TC HRGMv2_0014_22 HRGMv2_0014_22_11 18299 19645 + 2.A.66.1.33
Gene ID: HRGMv2_0014_22_4
Type: TC
Location: 7653 - 9065 (+)
Gene ID: HRGMv2_0014_22_5
Type: pfam
Location: 9152 - 10612 (+)
Gene ID: HRGMv2_0014_22_6
Type: pfam
Location: 10788 - 11291 (+)
Gene ID: HRGMv2_0014_22_7
Type: TC
Location: 11720 - 13078 (+)
Gene ID: HRGMv2_0014_22_8
Type: CAZyme
Location: 13190 - 15256 (-)
Gene ID: HRGMv2_0014_22_9
Type: pfam
Location: 15624 - 16142 (+)
Gene ID: HRGMv2_0014_22_10
Type: pfam
Location: 16170 - 18158 (+)
Gene ID: HRGMv2_0014_22_11
Type: TC
Location: 18299 - 19645 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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