Cluster: HRGMv2_0013_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0013_5 | HRGMv2_0013_5_29 | 33948 | 35066 | - | GT28 |
| pfam | HRGMv2_0013_5 | HRGMv2_0013_5_30 | 35097 | 36500 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0013_5 | HRGMv2_0013_5_31 | 36504 | 37490 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0013_5_29
Type: CAZyme
Location: 33948 - 35066 (-)
Type: CAZyme
Location: 33948 - 35066 (-)
Gene ID: HRGMv2_0013_5_30
Type: pfam
Location: 35097 - 36500 (-)
Type: pfam
Location: 35097 - 36500 (-)
Gene ID: HRGMv2_0013_5_31
Type: TC
Location: 36504 - 37490 (-)
Type: TC
Location: 36504 - 37490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900316935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.