dbCAN Logo

Cluster: HRGMv2_0013_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0013_1 HRGMv2_0013_1_119 138425 139117 + 3.A.1.140.1
pfam HRGMv2_0013_1 HRGMv2_0013_1_120 139101 139988 + FtsX | FtsX_ECD
STP HRGMv2_0013_1 HRGMv2_0013_1_121 140002 141168 + Peptidase_M23
TC HRGMv2_0013_1 HRGMv2_0013_1_122 141241 142401 + 9.B.174.1.1
pfam HRGMv2_0013_1 HRGMv2_0013_1_123 142492 143403 - Radical_SAM | Fer4_12
pfam HRGMv2_0013_1 HRGMv2_0013_1_124 143685 144860 + AICARFT_IMPCHas
CAZyme HRGMv2_0013_1 HRGMv2_0013_1_125 144919 145938 - GT51
Gene ID: HRGMv2_0013_1_119
Type: TC
Location: 138425 - 139117 (+)
Gene ID: HRGMv2_0013_1_120
Type: pfam
Location: 139101 - 139988 (+)
Gene ID: HRGMv2_0013_1_121
Type: STP
Location: 140002 - 141168 (+)
Gene ID: HRGMv2_0013_1_122
Type: TC
Location: 141241 - 142401 (+)
Gene ID: HRGMv2_0013_1_123
Type: pfam
Location: 142492 - 143403 (-)
Gene ID: HRGMv2_0013_1_124
Type: pfam
Location: 143685 - 144860 (+)
Gene ID: HRGMv2_0013_1_125
Type: CAZyme
Location: 144919 - 145938 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List