Cluster: HRGMv2_0013_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0013
- CGC Family ID: CGCFAM_01051
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0013_1 | HRGMv2_0013_1_97 | 111640 | 112746 | + | GH33 |
| TC | HRGMv2_0013_1 | HRGMv2_0013_1_98 | 112929 | 113885 | + | 2.A.80.1.3 |
| pfam | HRGMv2_0013_1 | HRGMv2_0013_1_99 | 113973 | 114443 | + | TctB |
| TC | HRGMv2_0013_1 | HRGMv2_0013_1_100 | 114457 | 115947 | + | 2.A.80.1.1 |
Gene ID: HRGMv2_0013_1_97
Type: CAZyme
Location: 111640 - 112746 (+)
Type: CAZyme
Location: 111640 - 112746 (+)
Gene ID: HRGMv2_0013_1_98
Type: TC
Location: 112929 - 113885 (+)
Type: TC
Location: 112929 - 113885 (+)
Gene ID: HRGMv2_0013_1_99
Type: pfam
Location: 113973 - 114443 (+)
Type: pfam
Location: 113973 - 114443 (+)
Gene ID: HRGMv2_0013_1_100
Type: TC
Location: 114457 - 115947 (+)
Type: TC
Location: 114457 - 115947 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900316935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.