Cluster: HRGMv2_0013_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0013_19 | HRGMv2_0013_19_29 | 26099 | 27598 | + | 2.A.63.1.2 |
| TC | HRGMv2_0013_19 | HRGMv2_0013_19_30 | 27595 | 29100 | + | 2.A.63.1.4 |
| NULL(UNKNOWN) | HRGMv2_0013_19 | HRGMv2_0013_19_31 | 29100 | 29366 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0013_19 | HRGMv2_0013_19_32 | 29359 | 31095 | + | 2.A.63.1.2 |
| pfam | HRGMv2_0013_19 | HRGMv2_0013_19_33 | 31261 | 32418 | + | Wzy_C |
| CAZyme | HRGMv2_0013_19 | HRGMv2_0013_19_34 | 32495 | 33652 | + | GT4 |
Gene ID: HRGMv2_0013_19_29
Type: TC
Location: 26099 - 27598 (+)
Type: TC
Location: 26099 - 27598 (+)
Gene ID: HRGMv2_0013_19_30
Type: TC
Location: 27595 - 29100 (+)
Type: TC
Location: 27595 - 29100 (+)
Gene ID: HRGMv2_0013_19_31
Type:
Location: 29100 - 29366 (+)
Type:
Location: 29100 - 29366 (+)
Gene ID: HRGMv2_0013_19_32
Type: TC
Location: 29359 - 31095 (+)
Type: TC
Location: 29359 - 31095 (+)
Gene ID: HRGMv2_0013_19_33
Type: pfam
Location: 31261 - 32418 (+)
Type: pfam
Location: 31261 - 32418 (+)
Gene ID: HRGMv2_0013_19_34
Type: CAZyme
Location: 32495 - 33652 (+)
Type: CAZyme
Location: 32495 - 33652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900316935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.