Cluster: HRGMv2_0011_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_12 | HRGMv2_0011_12_9 | 8244 | 9206 | + | 9.B.146.1.6 |
| pfam | HRGMv2_0011_12 | HRGMv2_0011_12_10 | 9296 | 10669 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_0011_12 | HRGMv2_0011_12_11 | 10666 | 11769 | + | GT28 |
Gene ID: HRGMv2_0011_12_9
Type: TC
Location: 8244 - 9206 (+)
Type: TC
Location: 8244 - 9206 (+)
Gene ID: HRGMv2_0011_12_10
Type: pfam
Location: 9296 - 10669 (+)
Type: pfam
Location: 9296 - 10669 (+)
Gene ID: HRGMv2_0011_12_11
Type: CAZyme
Location: 10666 - 11769 (+)
Type: CAZyme
Location: 10666 - 11769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.