Cluster: HRGMv2_0011_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_4 | HRGMv2_0011_4_21 | 21866 | 24190 | - | 3.A.7.7.1 |
| pfam | HRGMv2_0011_4 | HRGMv2_0011_4_22 | 24202 | 25326 | - | DNA_processg_A | DprA_WH |
| CAZyme | HRGMv2_0011_4 | HRGMv2_0011_4_23 | 25565 | 26665 | - | GT28 |
Gene ID: HRGMv2_0011_4_21
Type: TC
Location: 21866 - 24190 (-)
Type: TC
Location: 21866 - 24190 (-)
Gene ID: HRGMv2_0011_4_22
Type: pfam
Location: 24202 - 25326 (-)
Type: pfam
Location: 24202 - 25326 (-)
Gene ID: HRGMv2_0011_4_23
Type: CAZyme
Location: 25565 - 26665 (-)
Type: CAZyme
Location: 25565 - 26665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.