Cluster: HRGMv2_0011_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0011_3 | HRGMv2_0011_3_17 | 12170 | 14701 | - | GT30 |
| TC | HRGMv2_0011_3 | HRGMv2_0011_3_18 | 14721 | 16454 | - | 3.A.1.106.3 |
| CAZyme | HRGMv2_0011_3 | HRGMv2_0011_3_19 | 16451 | 17587 | - | GT19 |
Gene ID: HRGMv2_0011_3_17
Type: CAZyme
Location: 12170 - 14701 (-)
Type: CAZyme
Location: 12170 - 14701 (-)
Gene ID: HRGMv2_0011_3_18
Type: TC
Location: 14721 - 16454 (-)
Type: TC
Location: 14721 - 16454 (-)
Gene ID: HRGMv2_0011_3_19
Type: CAZyme
Location: 16451 - 17587 (-)
Type: CAZyme
Location: 16451 - 17587 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.