Cluster: HRGMv2_0011_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_58 | HRGMv2_0011_58_3 | 4481 | 5833 | + | 9.A.40.2.1 |
| TC | HRGMv2_0011_58 | HRGMv2_0011_58_4 | 5894 | 7264 | - | 3.B.1.1.6 |
| CAZyme | HRGMv2_0011_58 | HRGMv2_0011_58_5 | 7416 | 9467 | - | GT51 |
Gene ID: HRGMv2_0011_58_3
Type: TC
Location: 4481 - 5833 (+)
Type: TC
Location: 4481 - 5833 (+)
Gene ID: HRGMv2_0011_58_4
Type: TC
Location: 5894 - 7264 (-)
Type: TC
Location: 5894 - 7264 (-)
Gene ID: HRGMv2_0011_58_5
Type: CAZyme
Location: 7416 - 9467 (-)
Type: CAZyme
Location: 7416 - 9467 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.