Cluster: HRGMv2_0011_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_40 | HRGMv2_0011_40_6 | 6196 | 7599 | - | 2.A.25.1.5 |
| NULL(UNKNOWN) | HRGMv2_0011_40 | HRGMv2_0011_40_7 | 7754 | 8398 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0011_40 | HRGMv2_0011_40_8 | 8400 | 9446 | - | GT9 |
| CAZyme | HRGMv2_0011_40 | HRGMv2_0011_40_9 | 9446 | 10489 | - | GT9 |
Gene ID: HRGMv2_0011_40_6
Type: TC
Location: 6196 - 7599 (-)
Type: TC
Location: 6196 - 7599 (-)
Gene ID: HRGMv2_0011_40_7
Type:
Location: 7754 - 8398 (-)
Type:
Location: 7754 - 8398 (-)
Gene ID: HRGMv2_0011_40_8
Type: CAZyme
Location: 8400 - 9446 (-)
Type: CAZyme
Location: 8400 - 9446 (-)
Gene ID: HRGMv2_0011_40_9
Type: CAZyme
Location: 9446 - 10489 (-)
Type: CAZyme
Location: 9446 - 10489 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.