Cluster: HRGMv2_0011_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_29 | HRGMv2_0011_29_8 | 7651 | 8787 | + | 2.A.6.2.40 |
| TC | HRGMv2_0011_29 | HRGMv2_0011_29_9 | 8790 | 11873 | + | 2.A.6.3.1 |
| pfam | HRGMv2_0011_29 | HRGMv2_0011_29_10 | 11876 | 12811 | + | RNase_HII |
| pfam | HRGMv2_0011_29 | HRGMv2_0011_29_11 | 12817 | 13665 | + | YdjC |
| TC | HRGMv2_0011_29 | HRGMv2_0011_29_12 | 13707 | 14726 | + | 4.D.2.1.4 |
| CAZyme | HRGMv2_0011_29 | HRGMv2_0011_29_13 | 14769 | 16328 | + | GT83 |
Gene ID: HRGMv2_0011_29_8
Type: TC
Location: 7651 - 8787 (+)
Type: TC
Location: 7651 - 8787 (+)
Gene ID: HRGMv2_0011_29_9
Type: TC
Location: 8790 - 11873 (+)
Type: TC
Location: 8790 - 11873 (+)
Gene ID: HRGMv2_0011_29_10
Type: pfam
Location: 11876 - 12811 (+)
Type: pfam
Location: 11876 - 12811 (+)
Gene ID: HRGMv2_0011_29_11
Type: pfam
Location: 12817 - 13665 (+)
Type: pfam
Location: 12817 - 13665 (+)
Gene ID: HRGMv2_0011_29_12
Type: TC
Location: 13707 - 14726 (+)
Type: TC
Location: 13707 - 14726 (+)
Gene ID: HRGMv2_0011_29_13
Type: CAZyme
Location: 14769 - 16328 (+)
Type: CAZyme
Location: 14769 - 16328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.