Cluster: HRGMv2_0011_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- CGC Family ID: CGCFAM_05933
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0011_27 | HRGMv2_0011_27_1 | 360 | 9911 | - | 1.B.12.2.4 |
| pfam | HRGMv2_0011_27 | HRGMv2_0011_27_2 | 10700 | 11668 | - | TctC |
| CAZyme | HRGMv2_0011_27 | HRGMv2_0011_27_3 | 11696 | 12694 | - | GH33 |
Gene ID: HRGMv2_0011_27_1
Type: TC
Location: 360 - 9911 (-)
Type: TC
Location: 360 - 9911 (-)
Gene ID: HRGMv2_0011_27_2
Type: pfam
Location: 10700 - 11668 (-)
Type: pfam
Location: 10700 - 11668 (-)
Gene ID: HRGMv2_0011_27_3
Type: CAZyme
Location: 11696 - 12694 (-)
Type: CAZyme
Location: 11696 - 12694 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.