Cluster: HRGMv2_0011_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0011_1 | HRGMv2_0011_1_95 | 81118 | 82335 | - | GH171 |
| pfam | HRGMv2_0011_1 | HRGMv2_0011_1_96 | 82488 | 82835 | - | Glutaredoxin | ArsC |
| TC | HRGMv2_0011_1 | HRGMv2_0011_1_97 | 82849 | 84003 | - | 9.B.174.1.1 |
| STP | HRGMv2_0011_1 | HRGMv2_0011_1_98 | 84028 | 85173 | - | Peptidase_M23 |
| pfam | HRGMv2_0011_1 | HRGMv2_0011_1_99 | 85188 | 86081 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_0011_1 | HRGMv2_0011_1_100 | 86065 | 86751 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_0011_1_95
Type: CAZyme
Location: 81118 - 82335 (-)
Type: CAZyme
Location: 81118 - 82335 (-)
Gene ID: HRGMv2_0011_1_96
Type: pfam
Location: 82488 - 82835 (-)
Type: pfam
Location: 82488 - 82835 (-)
Gene ID: HRGMv2_0011_1_97
Type: TC
Location: 82849 - 84003 (-)
Type: TC
Location: 82849 - 84003 (-)
Gene ID: HRGMv2_0011_1_98
Type: STP
Location: 84028 - 85173 (-)
Type: STP
Location: 84028 - 85173 (-)
Gene ID: HRGMv2_0011_1_99
Type: pfam
Location: 85188 - 86081 (-)
Type: pfam
Location: 85188 - 86081 (-)
Gene ID: HRGMv2_0011_1_100
Type: TC
Location: 86065 - 86751 (-)
Type: TC
Location: 86065 - 86751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.