Cluster: HRGMv2_0007_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0007_19 | HRGMv2_0007_19_13 | 11649 | 12374 | - | 3.A.1.3.15 |
| TC | HRGMv2_0007_19 | HRGMv2_0007_19_14 | 12367 | 13023 | - | 3.A.1.3.15 |
| STP | HRGMv2_0007_19 | HRGMv2_0007_19_15 | 13040 | 13876 | - | SBP_bac_3 |
| pfam | HRGMv2_0007_19 | HRGMv2_0007_19_16 | 13997 | 14830 | - | Polysacc_deac_1 |
| CAZyme | HRGMv2_0007_19 | HRGMv2_0007_19_17 | 14830 | 15687 | - | CE4 |
Gene ID: HRGMv2_0007_19_13
Type: TC
Location: 11649 - 12374 (-)
Type: TC
Location: 11649 - 12374 (-)
Gene ID: HRGMv2_0007_19_14
Type: TC
Location: 12367 - 13023 (-)
Type: TC
Location: 12367 - 13023 (-)
Gene ID: HRGMv2_0007_19_15
Type: STP
Location: 13040 - 13876 (-)
Type: STP
Location: 13040 - 13876 (-)
Gene ID: HRGMv2_0007_19_16
Type: pfam
Location: 13997 - 14830 (-)
Type: pfam
Location: 13997 - 14830 (-)
Gene ID: HRGMv2_0007_19_17
Type: CAZyme
Location: 14830 - 15687 (-)
Type: CAZyme
Location: 14830 - 15687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.