Cluster: HRGMv2_0007_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0007_18 | HRGMv2_0007_18_28 | 21928 | 22890 | + | 9.B.146.1.6 |
| pfam | HRGMv2_0007_18 | HRGMv2_0007_18_29 | 22979 | 24352 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_0007_18 | HRGMv2_0007_18_30 | 24349 | 25452 | + | GT28 |
Gene ID: HRGMv2_0007_18_28
Type: TC
Location: 21928 - 22890 (+)
Type: TC
Location: 21928 - 22890 (+)
Gene ID: HRGMv2_0007_18_29
Type: pfam
Location: 22979 - 24352 (+)
Type: pfam
Location: 22979 - 24352 (+)
Gene ID: HRGMv2_0007_18_30
Type: CAZyme
Location: 24349 - 25452 (+)
Type: CAZyme
Location: 24349 - 25452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.