Cluster: HRGMv2_0007_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0007_17 | HRGMv2_0007_17_55 | 35743 | 36966 | - | GH171 |
| pfam | HRGMv2_0007_17 | HRGMv2_0007_17_56 | 37119 | 37466 | - | Glutaredoxin | ArsC |
| TC | HRGMv2_0007_17 | HRGMv2_0007_17_57 | 37479 | 38633 | - | 9.B.174.1.1 |
| STP | HRGMv2_0007_17 | HRGMv2_0007_17_58 | 38658 | 39803 | - | Peptidase_M23 |
| pfam | HRGMv2_0007_17 | HRGMv2_0007_17_59 | 39818 | 40711 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_0007_17 | HRGMv2_0007_17_60 | 40695 | 41381 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_0007_17_55
Type: CAZyme
Location: 35743 - 36966 (-)
Type: CAZyme
Location: 35743 - 36966 (-)
Gene ID: HRGMv2_0007_17_56
Type: pfam
Location: 37119 - 37466 (-)
Type: pfam
Location: 37119 - 37466 (-)
Gene ID: HRGMv2_0007_17_57
Type: TC
Location: 37479 - 38633 (-)
Type: TC
Location: 37479 - 38633 (-)
Gene ID: HRGMv2_0007_17_58
Type: STP
Location: 38658 - 39803 (-)
Type: STP
Location: 38658 - 39803 (-)
Gene ID: HRGMv2_0007_17_59
Type: pfam
Location: 39818 - 40711 (-)
Type: pfam
Location: 39818 - 40711 (-)
Gene ID: HRGMv2_0007_17_60
Type: TC
Location: 40695 - 41381 (-)
Type: TC
Location: 40695 - 41381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.