Cluster: HRGMv2_0007_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0007
- CGC Family ID: CGCFAM_00279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0007_12 | HRGMv2_0007_12_62 | 70552 | 71844 | - | GT2 |
| pfam | HRGMv2_0007_12 | HRGMv2_0007_12_63 | 71876 | 72559 | - | CDP-OH_P_transf |
| pfam | HRGMv2_0007_12 | HRGMv2_0007_12_64 | 72556 | 73188 | - | PS_Dcarbxylase |
| CAZyme | HRGMv2_0007_12 | HRGMv2_0007_12_65 | 73399 | 74127 | - | GT26 |
| TC | HRGMv2_0007_12 | HRGMv2_0007_12_66 | 74509 | 82734 | - | 1.C.75.1.2 |
| TC | HRGMv2_0007_12 | HRGMv2_0007_12_67 | 82770 | 84470 | - | 1.B.20.1.5 |
Gene ID: HRGMv2_0007_12_62
Type: CAZyme
Location: 70552 - 71844 (-)
Type: CAZyme
Location: 70552 - 71844 (-)
Gene ID: HRGMv2_0007_12_63
Type: pfam
Location: 71876 - 72559 (-)
Type: pfam
Location: 71876 - 72559 (-)
Gene ID: HRGMv2_0007_12_64
Type: pfam
Location: 72556 - 73188 (-)
Type: pfam
Location: 72556 - 73188 (-)
Gene ID: HRGMv2_0007_12_65
Type: CAZyme
Location: 73399 - 74127 (-)
Type: CAZyme
Location: 73399 - 74127 (-)
Gene ID: HRGMv2_0007_12_66
Type: TC
Location: 74509 - 82734 (-)
Type: TC
Location: 74509 - 82734 (-)
Gene ID: HRGMv2_0007_12_67
Type: TC
Location: 82770 - 84470 (-)
Type: TC
Location: 82770 - 84470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.