Cluster: HRGMv2_0007_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- CGC Family ID: CGCFAM_05933
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0007_28 | HRGMv2_0007_28_1 | 102 | 2039 | - | 1.B.14.3.1 |
| NULL(UNKNOWN) | HRGMv2_0007_28 | HRGMv2_0007_28_2 | 2070 | 2573 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0007_28 | HRGMv2_0007_28_3 | 2646 | 6284 | - | 1.B.12.2.4 |
| TC | HRGMv2_0007_28 | HRGMv2_0007_28_4 | 6287 | 13987 | - | 1.B.12.2.4 |
| pfam | HRGMv2_0007_28 | HRGMv2_0007_28_5 | 14781 | 15749 | - | TctC |
| CAZyme | HRGMv2_0007_28 | HRGMv2_0007_28_6 | 15777 | 16775 | - | GH33 |
Gene ID: HRGMv2_0007_28_1
Type: TC
Location: 102 - 2039 (-)
Type: TC
Location: 102 - 2039 (-)
Gene ID: HRGMv2_0007_28_2
Type:
Location: 2070 - 2573 (-)
Type:
Location: 2070 - 2573 (-)
Gene ID: HRGMv2_0007_28_3
Type: TC
Location: 2646 - 6284 (-)
Type: TC
Location: 2646 - 6284 (-)
Gene ID: HRGMv2_0007_28_4
Type: TC
Location: 6287 - 13987 (-)
Type: TC
Location: 6287 - 13987 (-)
Gene ID: HRGMv2_0007_28_5
Type: pfam
Location: 14781 - 15749 (-)
Type: pfam
Location: 14781 - 15749 (-)
Gene ID: HRGMv2_0007_28_6
Type: CAZyme
Location: 15777 - 16775 (-)
Type: CAZyme
Location: 15777 - 16775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.