Cluster: HRGMv2_0007_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0007_23 | HRGMv2_0007_23_20 | 23293 | 24852 | - | GT83 |
| TC | HRGMv2_0007_23 | HRGMv2_0007_23_21 | 24895 | 25914 | - | 4.D.2.1.4 |
| pfam | HRGMv2_0007_23 | HRGMv2_0007_23_22 | 25956 | 26804 | - | YdjC |
| pfam | HRGMv2_0007_23 | HRGMv2_0007_23_23 | 26810 | 27745 | - | RNase_HII |
| TC | HRGMv2_0007_23 | HRGMv2_0007_23_24 | 27748 | 30834 | - | 2.A.6.3.1 |
| TC | HRGMv2_0007_23 | HRGMv2_0007_23_25 | 30834 | 31952 | - | 2.A.6.2.40 |
Gene ID: HRGMv2_0007_23_20
Type: CAZyme
Location: 23293 - 24852 (-)
Type: CAZyme
Location: 23293 - 24852 (-)
Gene ID: HRGMv2_0007_23_21
Type: TC
Location: 24895 - 25914 (-)
Type: TC
Location: 24895 - 25914 (-)
Gene ID: HRGMv2_0007_23_22
Type: pfam
Location: 25956 - 26804 (-)
Type: pfam
Location: 25956 - 26804 (-)
Gene ID: HRGMv2_0007_23_23
Type: pfam
Location: 26810 - 27745 (-)
Type: pfam
Location: 26810 - 27745 (-)
Gene ID: HRGMv2_0007_23_24
Type: TC
Location: 27748 - 30834 (-)
Type: TC
Location: 27748 - 30834 (-)
Gene ID: HRGMv2_0007_23_25
Type: TC
Location: 30834 - 31952 (-)
Type: TC
Location: 30834 - 31952 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.