Cluster: HRGMv2_0007_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0007_7 | HRGMv2_0007_7_25 | 30926 | 32176 | + | 2.A.16.2.2 |
| pfam | HRGMv2_0007_7 | HRGMv2_0007_7_26 | 32180 | 32851 | - | Lactamase_B | Lactamase_B_2 | Lactamase_B_3 |
| CAZyme | HRGMv2_0007_7 | HRGMv2_0007_7_27 | 33050 | 33997 | + | GH73 |
| pfam | HRGMv2_0007_7 | HRGMv2_0007_7_28 | 34002 | 34520 | + | SpoU_methylase |
| pfam | HRGMv2_0007_7 | HRGMv2_0007_7_29 | 34517 | 34873 | + | PTPS |
| TC | HRGMv2_0007_7 | HRGMv2_0007_7_30 | 34875 | 35651 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_0007_7_25
Type: TC
Location: 30926 - 32176 (+)
Type: TC
Location: 30926 - 32176 (+)
Gene ID: HRGMv2_0007_7_26
Type: pfam
Location: 32180 - 32851 (-)
Type: pfam
Location: 32180 - 32851 (-)
Gene ID: HRGMv2_0007_7_27
Type: CAZyme
Location: 33050 - 33997 (+)
Type: CAZyme
Location: 33050 - 33997 (+)
Gene ID: HRGMv2_0007_7_28
Type: pfam
Location: 34002 - 34520 (+)
Type: pfam
Location: 34002 - 34520 (+)
Gene ID: HRGMv2_0007_7_29
Type: pfam
Location: 34517 - 34873 (+)
Type: pfam
Location: 34517 - 34873 (+)
Gene ID: HRGMv2_0007_7_30
Type: TC
Location: 34875 - 35651 (+)
Type: TC
Location: 34875 - 35651 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.