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Cluster: GasparriniAJ_2019_SRR9865829_bin.4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC GasparriniAJ_2019_SRR9865829_bin.4_k141_16426 GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_11 8046 8534 + 4.A.6.1.16
TC GasparriniAJ_2019_SRR9865829_bin.4_k141_16426 GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_12 8550 9323 + 4.A.6.1.13
TC GasparriniAJ_2019_SRR9865829_bin.4_k141_16426 GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_13 9316 10176 + 4.A.6.1.13
pfam GasparriniAJ_2019_SRR9865829_bin.4_k141_16426 GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_14 10210 10614 + EIIA-man
CAZyme GasparriniAJ_2019_SRR9865829_bin.4_k141_16426 GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_15 10644 12080 + GH32
Gene ID: GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_11
Type: TC
Location: 8046 - 8534 (+)
Gene ID: GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_12
Type: TC
Location: 8550 - 9323 (+)
Gene ID: GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_13
Type: TC
Location: 9316 - 10176 (+)
Gene ID: GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_14
Type: pfam
Location: 10210 - 10614 (+)
Gene ID: GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_15
Type: CAZyme
Location: 10644 - 12080 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
GasparriniAJ_2019_SRR9865829_bin.4_k141_16426_11 vegetarian > omnivore 1.54875 0.03579

🧭 Explore Read Mapping of CGC

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