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Cluster: GasparriniAJ_2019_SRR9865778_bin.2_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_76 96261 97637 - 3.A.1.17.10
pfam GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_77 97641 98699 - NMT1
TC GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_78 98702 100513 - 3.D.1.5.1
STP GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_79 100507 102339 - Pyr_redox_2
CAZyme GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_80 102596 103978 - GH4
TC GasparriniAJ_2019_SRR9865778_bin.2_k141_16941 GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_81 103982 104872 - 4.A.1.1.16
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_76
Type: TC
Location: 96261 - 97637 (-)
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_77
Type: pfam
Location: 97641 - 98699 (-)
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_78
Type: TC
Location: 98702 - 100513 (-)
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_79
Type: STP
Location: 100507 - 102339 (-)
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_80
Type: CAZyme
Location: 102596 - 103978 (-)
Gene ID: GasparriniAJ_2019_SRR9865778_bin.2_k141_16941_81
Type: TC
Location: 103982 - 104872 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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