Cluster: GasparriniAJ_2019_SRR9865738_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865738_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615 | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_19 | 15836 | 16879 | + | GT9 |
| TC | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615 | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_20 | 16876 | 17781 | + | 2.A.7.3.58 |
| CAZyme | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615 | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_21 | 17778 | 18731 | + | GT9 |
| TC | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615 | GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_22 | 18897 | 20009 | + | 1.B.1.3.3 |
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_19
Type: CAZyme
Location: 15836 - 16879 (+)
Type: CAZyme
Location: 15836 - 16879 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_20
Type: TC
Location: 16876 - 17781 (+)
Type: TC
Location: 16876 - 17781 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_21
Type: CAZyme
Location: 17778 - 18731 (+)
Type: CAZyme
Location: 17778 - 18731 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_7615_22
Type: TC
Location: 18897 - 20009 (+)
Type: TC
Location: 18897 - 20009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.