dbCAN Logo

Cluster: GasparriniAJ_2019_SRR9865738_bin.1_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_14 13438 15693 - 1.B.14.1.3
TC GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_15 15943 16650 + 2.A.88.8.6
TC GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_16 16665 17981 + 2.A.1.15.11
peptidase GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_17 18203 19030 + C44.UPW
STP GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_18 19099 20469 - Pyr_redox_2
CAZyme GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_19 20684 21811 + GT2
CAZyme GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_20 21846 22820 + GT2
CAZyme GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_21 22839 23678 - GT8
TC GasparriniAJ_2019_SRR9865738_bin.1_k141_5531 GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_22 23834 24745 - 1.B.40.2.2
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_14
Type: TC
Location: 13438 - 15693 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_15
Type: TC
Location: 15943 - 16650 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_16
Type: TC
Location: 16665 - 17981 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_17
Type: peptidase
Location: 18203 - 19030 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_18
Type: STP
Location: 19099 - 20469 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_19
Type: CAZyme
Location: 20684 - 21811 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_20
Type: CAZyme
Location: 21846 - 22820 (+)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_21
Type: CAZyme
Location: 22839 - 23678 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_22
Type: TC
Location: 23834 - 24745 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_17 vegan > omnivore 1.69316 0.01144
GasparriniAJ_2019_SRR9865738_bin.1_k141_5531_17 vegetarian > omnivore 1.11808 0.00755

🧭 Explore Read Mapping of CGC

← Back to Cluster List