Cluster: GasparriniAJ_2019_SRR9865738_bin.1_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865738_bin.1
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465 | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_23 | 21929 | 22981 | - | GT28 |
| TC | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465 | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_24 | 22990 | 24174 | - | 2.A.103.1.1 |
| pfam | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465 | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_25 | 24190 | 25503 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465 | GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_26 | 25566 | 26648 | - | 9.B.146.1.6 |
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_23
Type: CAZyme
Location: 21929 - 22981 (-)
Type: CAZyme
Location: 21929 - 22981 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_24
Type: TC
Location: 22990 - 24174 (-)
Type: TC
Location: 22990 - 24174 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_25
Type: pfam
Location: 24190 - 25503 (-)
Type: pfam
Location: 24190 - 25503 (-)
Gene ID: GasparriniAJ_2019_SRR9865738_bin.1_k141_4465_26
Type: TC
Location: 25566 - 26648 (-)
Type: TC
Location: 25566 - 26648 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.