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Cluster: GasparriniAJ_2019_SRR9865562_bin.4_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme GasparriniAJ_2019_SRR9865562_bin.4_k141_24901 GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_35 41572 42810 - GH105
pfam GasparriniAJ_2019_SRR9865562_bin.4_k141_24901 GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_36 42918 43586 - Lipase_GDSL | Lipase_GDSL_2
CAZyme GasparriniAJ_2019_SRR9865562_bin.4_k141_24901 GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_37 43634 45823 - CE19 | CE8
CAZyme GasparriniAJ_2019_SRR9865562_bin.4_k141_24901 GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_38 45958 47553 - GH28
TC GasparriniAJ_2019_SRR9865562_bin.4_k141_24901 GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_39 47669 49228 - 2.A.2.5.1
Gene ID: GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_35
Type: CAZyme
Location: 41572 - 42810 (-)
Gene ID: GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_36
Type: pfam
Location: 42918 - 43586 (-)
Gene ID: GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_37
Type: CAZyme
Location: 43634 - 45823 (-)
Gene ID: GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_38
Type: CAZyme
Location: 45958 - 47553 (-)
Gene ID: GasparriniAJ_2019_SRR9865562_bin.4_k141_24901_39
Type: TC
Location: 47669 - 49228 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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