Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865541_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673 | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_12 | 11714 | 11950 | + | 9.A.8.1.6 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673 | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_13 | 11940 | 13955 | + | 9.A.8.1.6 |
| pfam | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673 | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_14 | 14003 | 14644 | + | LUD_dom |
| CAZyme | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673 | GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_15 | 14646 | 16073 | + | GH77 |
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_12
Type: TC
Location: 11714 - 11950 (+)
Type: TC
Location: 11714 - 11950 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_13
Type: TC
Location: 11940 - 13955 (+)
Type: TC
Location: 11940 - 13955 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_14
Type: pfam
Location: 14003 - 14644 (+)
Type: pfam
Location: 14003 - 14644 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_16673_15
Type: CAZyme
Location: 14646 - 16073 (+)
Type: CAZyme
Location: 14646 - 16073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.