dbCAN HGM

Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_13	10374	11216	-	GH25
pfam	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_14	11261	11728	-	DUF1003
pfam	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_15	11999	15220	+	MGS \| ATP-grasp \| ATP-grasp \| CPSase_L_D2 \| CPSase_L_D2 \| CPSase_L_D3 \| Dala_Dala_lig_C \| Dala_Dala_lig_C \| ATPgrasp_Ter
TC	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631	GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_16	15367	15849	-	2.A.88.9.1

Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_13
Type: CAZyme
Location: 10374 - 11216 (-)

Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_14
Type: pfam
Location: 11261 - 11728 (-)

Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_15
Type: pfam
Location: 11999 - 15220 (+)

Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_16
Type: TC
Location: 15367 - 15849 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
GasparriniAJ_2019_SRR9865541_bin.10_k141_6631_15	vegan > omnivore	1.37728	0.00358