Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865541_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935 | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_46 | 47314 | 48066 | + | 3.A.1.121.3 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935 | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_47 | 48277 | 48789 | + | 3.A.1.121.3 |
| NULL(UNKNOWN) | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935 | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_48 | 49294 | 50259 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935 | GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_49 | 50746 | 55950 | + | CBM32 | CBM32 |
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_46
Type: TC
Location: 47314 - 48066 (+)
Type: TC
Location: 47314 - 48066 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_47
Type: TC
Location: 48277 - 48789 (+)
Type: TC
Location: 48277 - 48789 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_48
Type:
Location: 49294 - 50259 (+)
Type:
Location: 49294 - 50259 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_1935_49
Type: CAZyme
Location: 50746 - 55950 (+)
Type: CAZyme
Location: 50746 - 55950 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.