Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865541_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174 | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_7 | 4625 | 5059 | - | 4.A.6.1.16 |
| STP | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174 | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_8 | 5065 | 6252 | - | SIS | SIS |
| CAZyme | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174 | GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_9 | 6480 | 7631 | + | CE9 |
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_7
Type: TC
Location: 4625 - 5059 (-)
Type: TC
Location: 4625 - 5059 (-)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_8
Type: STP
Location: 5065 - 6252 (-)
Type: STP
Location: 5065 - 6252 (-)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_25174_9
Type: CAZyme
Location: 6480 - 7631 (+)
Type: CAZyme
Location: 6480 - 7631 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.