Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865541_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_19 | 19783 | 20697 | - | 8.A.21.2.2 |
| pfam | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_20 | 20711 | 21136 | - | NfeD |
| NULL(UNKNOWN) | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_21 | 21151 | 21516 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_22 | 21863 | 27070 | + | CBM32 |
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_19
Type: TC
Location: 19783 - 20697 (-)
Type: TC
Location: 19783 - 20697 (-)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_20
Type: pfam
Location: 20711 - 21136 (-)
Type: pfam
Location: 20711 - 21136 (-)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_21
Type:
Location: 21151 - 21516 (-)
Type:
Location: 21151 - 21516 (-)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23384_22
Type: CAZyme
Location: 21863 - 27070 (+)
Type: CAZyme
Location: 21863 - 27070 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.