Cluster: GasparriniAJ_2019_SRR9865541_bin.10_CGC11
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: GasparriniAJ_2019_SRR9865541_bin.10
- CGC Family ID: CGCFAM_01711
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_13 | 11318 | 11977 | + | 3.A.2.1.5 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_14 | 12051 | 12278 | + | 3.A.2.1.5 |
| pfam | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_15 | 12296 | 12796 | + | ATP-synt_B |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_16 | 12796 | 13329 | + | 3.A.2.1.5 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_17 | 13339 | 14862 | + | 3.A.2.1.5 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_18 | 14869 | 15726 | + | 3.A.2.1.5 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_19 | 15738 | 17144 | + | 3.A.2.1.5 |
| TC | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_20 | 17137 | 17535 | + | 3.A.2.1.5 |
| NULL(UNKNOWN) | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_21 | 17795 | 18568 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350 | GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_22 | 18507 | 21218 | + | GH105 |
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_13
Type: TC
Location: 11318 - 11977 (+)
Type: TC
Location: 11318 - 11977 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_14
Type: TC
Location: 12051 - 12278 (+)
Type: TC
Location: 12051 - 12278 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_15
Type: pfam
Location: 12296 - 12796 (+)
Type: pfam
Location: 12296 - 12796 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_16
Type: TC
Location: 12796 - 13329 (+)
Type: TC
Location: 12796 - 13329 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_17
Type: TC
Location: 13339 - 14862 (+)
Type: TC
Location: 13339 - 14862 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_18
Type: TC
Location: 14869 - 15726 (+)
Type: TC
Location: 14869 - 15726 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_19
Type: TC
Location: 15738 - 17144 (+)
Type: TC
Location: 15738 - 17144 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_20
Type: TC
Location: 17137 - 17535 (+)
Type: TC
Location: 17137 - 17535 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_21
Type:
Location: 17795 - 18568 (+)
Type:
Location: 17795 - 18568 (+)
Gene ID: GasparriniAJ_2019_SRR9865541_bin.10_k141_23350_22
Type: CAZyme
Location: 18507 - 21218 (+)
Type: CAZyme
Location: 18507 - 21218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia spiroformis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.