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Cluster: GH232_104_sub_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_396398 k141_396398_3 3698 4735 - GT4
TC k141_396398 k141_396398_4 4719 6218 - 2.A.66.2.16
pfam k141_396398 k141_396398_5 6371 7684 + AAA_21
pfam k141_396398 k141_396398_6 7761 8825 + NTP_transferase | ManC_GMP_beta-helix
CAZyme k141_396398 k141_396398_7 8827 9966 + GT4
CAZyme k141_396398 k141_396398_8 9955 11607 - GH123
NULL(UNKNOWN) k141_396398 k141_396398_9 11673 13685 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_396398 k141_396398_10 13981 17529 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_396398 k141_396398_11 17526 19379 - GH136
NULL(UNKNOWN) k141_396398 k141_396398_12 19376 19852 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_396398 k141_396398_13 19855 21483 - SBP_bac_1
TC k141_396398 k141_396398_14 21498 22409 - 3.A.1.1.29
Gene ID: k141_396398_3
Type: CAZyme
Location: 3698 - 4735 (-)
Gene ID: k141_396398_4
Type: TC
Location: 4719 - 6218 (-)
Gene ID: k141_396398_5
Type: pfam
Location: 6371 - 7684 (+)
Gene ID: k141_396398_6
Type: pfam
Location: 7761 - 8825 (+)
Gene ID: k141_396398_7
Type: CAZyme
Location: 8827 - 9966 (+)
Gene ID: k141_396398_8
Type: CAZyme
Location: 9955 - 11607 (-)
Gene ID: k141_396398_9
Type:
Location: 11673 - 13685 (-)
Gene ID: k141_396398_10
Type:
Location: 13981 - 17529 (-)
Gene ID: k141_396398_11
Type: CAZyme
Location: 17526 - 19379 (-)
Gene ID: k141_396398_12
Type:
Location: 19376 - 19852 (-)
Gene ID: k141_396398_13
Type: STP
Location: 19855 - 21483 (-)
Gene ID: k141_396398_14
Type: TC
Location: 21498 - 22409 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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