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Cluster: GH232_104_sub_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_58004 k141_58004_16 16203 16997 - 3.A.1.1.15
pfam k141_58004 k141_58004_17 16960 18222 - ROK
CAZyme k141_58004 k141_58004_18 18230 19858 - GH20
CAZyme k141_58004 k141_58004_19 19861 21921 - CE20
pfam k141_58004 k141_58004_20 21927 23192 - CBM_X2
NULL(UNKNOWN) k141_58004 k141_58004_21 23210 24604 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_58004 k141_58004_22 24601 25488 - 3.A.1.1.20
pfam k141_58004 k141_58004_23 25555 27969 - Cadherin_4 | Big_9
TC k141_58004 k141_58004_24 28023 28973 - 3.A.1.1.23
NULL(UNKNOWN) k141_58004 k141_58004_25 28977 30287 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_58004 k141_58004_26 30338 31714 - SBP_bac_1
CAZyme k141_58004 k141_58004_27 31949 33856 - GH78
pfam k141_58004 k141_58004_28 34113 35723 - PEPCK_ATP
pfam k141_58004 k141_58004_29 35759 36490 - BPL_LplA_LipB
TC k141_58004 k141_58004_30 36495 37733 - 3.B.1.1.5
pfam k141_58004 k141_58004_31 37737 38117 - Biotin_lipoyl | Biotin_lipoyl_2
NULL(UNKNOWN) k141_58004 k141_58004_32 38114 38467 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_58004 k141_58004_33 38464 39831 - 3.B.1.1.6
TC k141_58004 k141_58004_34 40000 40617 - 3.A.1.25.5
Gene ID: k141_58004_16
Type: TC
Location: 16203 - 16997 (-)
Gene ID: k141_58004_17
Type: pfam
Location: 16960 - 18222 (-)
Gene ID: k141_58004_18
Type: CAZyme
Location: 18230 - 19858 (-)
Gene ID: k141_58004_19
Type: CAZyme
Location: 19861 - 21921 (-)
Gene ID: k141_58004_20
Type: pfam
Location: 21927 - 23192 (-)
Gene ID: k141_58004_21
Type:
Location: 23210 - 24604 (-)
Gene ID: k141_58004_22
Type: TC
Location: 24601 - 25488 (-)
Gene ID: k141_58004_23
Type: pfam
Location: 25555 - 27969 (-)
Gene ID: k141_58004_24
Type: TC
Location: 28023 - 28973 (-)
Gene ID: k141_58004_25
Type:
Location: 28977 - 30287 (-)
Gene ID: k141_58004_26
Type: STP
Location: 30338 - 31714 (-)
Gene ID: k141_58004_27
Type: CAZyme
Location: 31949 - 33856 (-)
Gene ID: k141_58004_28
Type: pfam
Location: 34113 - 35723 (-)
Gene ID: k141_58004_29
Type: pfam
Location: 35759 - 36490 (-)
Gene ID: k141_58004_30
Type: TC
Location: 36495 - 37733 (-)
Gene ID: k141_58004_31
Type: pfam
Location: 37737 - 38117 (-)
Gene ID: k141_58004_32
Type:
Location: 38114 - 38467 (-)
Gene ID: k141_58004_33
Type: TC
Location: 38464 - 39831 (-)
Gene ID: k141_58004_34
Type: TC
Location: 40000 - 40617 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-826

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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