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Cluster: GH210_bin.66_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_133231 k141_133231_47 55109 55636 - 3.D.1.8.1
pfam k141_133231 k141_133231_48 56043 57395 - TRAM | tRNA_U5-meth_tr
TC k141_133231 k141_133231_49 57733 61422 - 3.A.1.106.7
CAZyme k141_133231 k141_133231_50 61527 62513 - GT2
pfam k141_133231 k141_133231_51 62781 63197 + GtrA_DPMS_TM
CAZyme k141_133231 k141_133231_52 63213 64601 + GT28
TC k141_133231 k141_133231_53 64647 66236 + 1.I.1.1.3
TF k141_133231 k141_133231_54 66264 66941 - Trans_reg_C
pfam k141_133231 k141_133231_55 66974 68317 - Gln-synt_C | Gln-synt_N
TC k141_133231 k141_133231_56 68652 69512 + 3.A.1.24.5
TC k141_133231 k141_133231_57 69542 70291 + 3.A.1.24.2
TC k141_133231 k141_133231_58 70295 70972 + 3.A.1.24.5
pfam k141_133231 k141_133231_59 71255 71665 - Pep_deformylase
TC k141_133231 k141_133231_60 71741 72355 - 9.B.18.1.2
STP k141_133231 k141_133231_61 72356 73585 - Aminotran_1_2
CAZyme k141_133231 k141_133231_62 73727 74992 - GT4
pfam k141_133231 k141_133231_63 75162 75560 - Fer4_9
TC k141_133231 k141_133231_64 75570 77966 - 5.A.3.3.1
Gene ID: k141_133231_47
Type: TC
Location: 55109 - 55636 (-)
Gene ID: k141_133231_48
Type: pfam
Location: 56043 - 57395 (-)
Gene ID: k141_133231_49
Type: TC
Location: 57733 - 61422 (-)
Gene ID: k141_133231_50
Type: CAZyme
Location: 61527 - 62513 (-)
Gene ID: k141_133231_51
Type: pfam
Location: 62781 - 63197 (+)
Gene ID: k141_133231_52
Type: CAZyme
Location: 63213 - 64601 (+)
Gene ID: k141_133231_53
Type: TC
Location: 64647 - 66236 (+)
Gene ID: k141_133231_54
Type: TF
Location: 66264 - 66941 (-)
Gene ID: k141_133231_55
Type: pfam
Location: 66974 - 68317 (-)
Gene ID: k141_133231_56
Type: TC
Location: 68652 - 69512 (+)
Gene ID: k141_133231_57
Type: TC
Location: 69542 - 70291 (+)
Gene ID: k141_133231_58
Type: TC
Location: 70295 - 70972 (+)
Gene ID: k141_133231_59
Type: pfam
Location: 71255 - 71665 (-)
Gene ID: k141_133231_60
Type: TC
Location: 71741 - 72355 (-)
Gene ID: k141_133231_61
Type: STP
Location: 72356 - 73585 (-)
Gene ID: k141_133231_62
Type: CAZyme
Location: 73727 - 74992 (-)
Gene ID: k141_133231_63
Type: pfam
Location: 75162 - 75560 (-)
Gene ID: k141_133231_64
Type: TC
Location: 75570 - 77966 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_133231_48 vegetarian > omnivore 2.52556 0.00062
k141_133231_48 vegetarian > vegan 1.60226 0.00250
k141_133231_60 vegan > omnivore 1.56533 0.01185
k141_133231_60 vegetarian > omnivore 1.73864 0.00062
k141_133231_61 vegan > omnivore 1.59364 0.01185
k141_133231_61 vegetarian > omnivore 2.09709 0.00062
k141_133231_63 vegan > omnivore 1.17779 0.01185
k141_133231_63 vegetarian > omnivore 1.68316 0.00062

🧭 Explore Read Mapping of CGC

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