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Cluster: GH210_bin.66_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38942 k141_38942_1 167 1126 - 2.A.7.18.1
pfam k141_38942 k141_38942_2 1123 2061 - Choline_kinase | APH
TC k141_38942 k141_38942_3 2159 3400 - 9.A.28.1.1
pfam k141_38942 k141_38942_4 3470 5251 - NTP_transferase | Choline_kinase | APH | NTP_transf_3 | HTH_24
pfam k141_38942 k141_38942_5 5351 6193 - LicD
CAZyme k141_38942 k141_38942_6 6233 7360 - GT4
Gene ID: k141_38942_1
Type: TC
Location: 167 - 1126 (-)
Gene ID: k141_38942_2
Type: pfam
Location: 1123 - 2061 (-)
Gene ID: k141_38942_3
Type: TC
Location: 2159 - 3400 (-)
Gene ID: k141_38942_4
Type: pfam
Location: 3470 - 5251 (-)
Gene ID: k141_38942_5
Type: pfam
Location: 5351 - 6193 (-)
Gene ID: k141_38942_6
Type: CAZyme
Location: 6233 - 7360 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_38942_1 vegetarian > omnivore 1.50539 0.00062
k141_38942_2 vegan > omnivore 1.07591 0.01185
k141_38942_2 vegetarian > omnivore 2.51890 0.00062
k141_38942_2 vegetarian > vegan 1.44299 0.00250
k141_38942_3 vegan > omnivore 2.11788 0.01185
k141_38942_3 vegetarian > omnivore 2.68262 0.00062
k141_38942_4 vegetarian > omnivore 1.18661 0.00062
k141_38942_5 vegan > omnivore 2.52735 0.01185
k141_38942_5 vegetarian > omnivore 3.17611 0.00062
k141_38942_6 vegetarian > omnivore 1.63821 0.00062

🧭 Explore Read Mapping of CGC

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