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Cluster: GH208_bin.76_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_287365 k141_287365_28 25195 26256 - 3.A.1.6.3
TC k141_287365 k141_287365_29 26272 27123 - 3.A.1.6.1
TC k141_287365 k141_287365_30 27197 28081 - 3.A.1.6.1
TC k141_287365 k141_287365_31 28062 29093 - 3.A.1.6.1
pfam k141_287365 k141_287365_32 29315 30682 - TP_methylase | NAD_binding_7
STP k141_287365 k141_287365_33 30707 31717 - Peripla_BP_2
CAZyme k141_287365 k141_287365_34 31744 33270 - GH25
pfam k141_287365 k141_287365_35 33677 34624 + Ldh_1_N | Ldh_1_C
TC k141_287365 k141_287365_36 34726 35604 - 3.A.1.1.36
TC k141_287365 k141_287365_37 35607 36578 - 3.A.1.1.4
NULL(UNKNOWN) k141_287365 k141_287365_38 36740 38113 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_287365 k141_287365_39 38179 39183 - LacI
CAZyme k141_287365 k141_287365_40 39642 42086 + GH94
TC k141_287365 k141_287365_41 42340 43491 - 2.A.86.1.5
pfam k141_287365 k141_287365_42 43763 45691 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
TC k141_287365 k141_287365_43 45696 46367 - 9.B.143.2.3
TC k141_287365 k141_287365_44 46530 48122 - 2.A.36.6.11
TC k141_287365 k141_287365_45 48270 48839 - 2.A.115.2.14
TC k141_287365 k141_287365_46 48948 49640 - 2.A.122.1.6
TC k141_287365 k141_287365_47 49735 50097 - 1.E.14.1.1
Gene ID: k141_287365_28
Type: TC
Location: 25195 - 26256 (-)
Gene ID: k141_287365_29
Type: TC
Location: 26272 - 27123 (-)
Gene ID: k141_287365_30
Type: TC
Location: 27197 - 28081 (-)
Gene ID: k141_287365_31
Type: TC
Location: 28062 - 29093 (-)
Gene ID: k141_287365_32
Type: pfam
Location: 29315 - 30682 (-)
Gene ID: k141_287365_33
Type: STP
Location: 30707 - 31717 (-)
Gene ID: k141_287365_34
Type: CAZyme
Location: 31744 - 33270 (-)
Gene ID: k141_287365_35
Type: pfam
Location: 33677 - 34624 (+)
Gene ID: k141_287365_36
Type: TC
Location: 34726 - 35604 (-)
Gene ID: k141_287365_37
Type: TC
Location: 35607 - 36578 (-)
Gene ID: k141_287365_38
Type:
Location: 36740 - 38113 (-)
Gene ID: k141_287365_39
Type: TF
Location: 38179 - 39183 (-)
Gene ID: k141_287365_40
Type: CAZyme
Location: 39642 - 42086 (+)
Gene ID: k141_287365_41
Type: TC
Location: 42340 - 43491 (-)
Gene ID: k141_287365_42
Type: pfam
Location: 43763 - 45691 (-)
Gene ID: k141_287365_43
Type: TC
Location: 45696 - 46367 (-)
Gene ID: k141_287365_44
Type: TC
Location: 46530 - 48122 (-)
Gene ID: k141_287365_45
Type: TC
Location: 48270 - 48839 (-)
Gene ID: k141_287365_46
Type: TC
Location: 48948 - 49640 (-)
Gene ID: k141_287365_47
Type: TC
Location: 49735 - 50097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_287365_36 vegetarian > vegan 2.52134 0.00290

🧭 Explore Read Mapping of CGC

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