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Cluster: GH208_bin.76_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_184495 k141_184495_13 13002 14399 + 2.A.118.1.4
peptidase k141_184495 k141_184495_14 14416 15594 + M20.UPD
CAZyme k141_184495 k141_184495_15 15723 17342 + CBM91 | GH43_12
CAZyme k141_184495 k141_184495_16 17373 20045 + GH95
CAZyme k141_184495 k141_184495_17 20097 22400 + GH3
TF k141_184495 k141_184495_18 22415 23578 - HTH_AraC
CAZyme k141_184495 k141_184495_19 23955 30452 + CE8 | PL1_2
CAZyme k141_184495 k141_184495_20 30712 31683 + CE12
Gene ID: k141_184495_13
Type: TC
Location: 13002 - 14399 (+)
Gene ID: k141_184495_14
Type: peptidase
Location: 14416 - 15594 (+)
Gene ID: k141_184495_15
Type: CAZyme
Location: 15723 - 17342 (+)
Gene ID: k141_184495_16
Type: CAZyme
Location: 17373 - 20045 (+)
Gene ID: k141_184495_17
Type: CAZyme
Location: 20097 - 22400 (+)
Gene ID: k141_184495_18
Type: TF
Location: 22415 - 23578 (-)
Gene ID: k141_184495_19
Type: CAZyme
Location: 23955 - 30452 (+)
Gene ID: k141_184495_20
Type: CAZyme
Location: 30712 - 31683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_184495_17 vegetarian > vegan 4.90165 0.00290
k141_184495_18 vegetarian > omnivore 1.53447 0.04105
k141_184495_18 vegetarian > vegan 17.00558 0.00290
k141_184495_19 vegetarian > vegan 4.39143 0.00290
k141_184495_19 vegetarian > omnivore 1.98345 0.04105
k141_184495_20 vegetarian > vegan 1.98364 0.00290
k141_184495_20 vegetarian > omnivore 1.74604 0.04105

🧭 Explore Read Mapping of CGC

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