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Cluster: GH205_bin.21_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_469361 k141_469361_3 4784 7153 - GH2
CAZyme k141_469361 k141_469361_4 7350 8411 - GH53
CAZyme k141_469361 k141_469361_5 8663 10558 - GH32
NULL(UNKNOWN) k141_469361 k141_469361_6 10723 13026 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_469361 k141_469361_7 13545 14759 + 2.A.1.7.17
STP k141_469361 k141_469361_8 14929 15801 + PfkB
TC k141_469361 k141_469361_9 16127 17341 + 2.A.1.35.1
TC k141_469361 k141_469361_10 17414 19342 + 3.A.3.5.18
pfam k141_469361 k141_469361_11 20268 20810 + Chromate_transp
TC k141_469361 k141_469361_12 20807 21379 + 2.A.51.1.6
Gene ID: k141_469361_3
Type: CAZyme
Location: 4784 - 7153 (-)
Gene ID: k141_469361_4
Type: CAZyme
Location: 7350 - 8411 (-)
Gene ID: k141_469361_5
Type: CAZyme
Location: 8663 - 10558 (-)
Gene ID: k141_469361_6
Type:
Location: 10723 - 13026 (-)
Gene ID: k141_469361_7
Type: TC
Location: 13545 - 14759 (+)
Gene ID: k141_469361_8
Type: STP
Location: 14929 - 15801 (+)
Gene ID: k141_469361_9
Type: TC
Location: 16127 - 17341 (+)
Gene ID: k141_469361_10
Type: TC
Location: 17414 - 19342 (+)
Gene ID: k141_469361_11
Type: pfam
Location: 20268 - 20810 (+)
Gene ID: k141_469361_12
Type: TC
Location: 20807 - 21379 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_469361_9 vegetarian > vegan 1.68576 0.02892
k141_469361_11 vegetarian > omnivore 1.03548 0.04196

🧭 Explore Read Mapping of CGC

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