Cluster: GH192_76_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: GH192_76
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_25078 | k141_25078_3 | 762 | 2003 | - | GT2 |
| CAZyme | k141_25078 | k141_25078_4 | 2013 | 3929 | - | CE4 | GH153 |
| TC | k141_25078 | k141_25078_5 | 3978 | 6368 | - | 1.B.55.1.3 |
| TC | k141_25078 | k141_25078_6 | 6579 | 7346 | - | 3.A.1.14.8 |
| TC | k141_25078 | k141_25078_7 | 7346 | 8329 | - | 3.A.1.14.1 |
| TC | k141_25078 | k141_25078_8 | 8329 | 9318 | - | 3.A.1.14.1 |
| TC | k141_25078 | k141_25078_9 | 9318 | 10208 | - | 3.A.1.14.1 |
Gene ID: k141_25078_3
Type: CAZyme
Location: 762 - 2003 (-)
Type: CAZyme
Location: 762 - 2003 (-)
Gene ID: k141_25078_4
Type: CAZyme
Location: 2013 - 3929 (-)
Type: CAZyme
Location: 2013 - 3929 (-)
Gene ID: k141_25078_5
Type: TC
Location: 3978 - 6368 (-)
Type: TC
Location: 3978 - 6368 (-)
Gene ID: k141_25078_6
Type: TC
Location: 6579 - 7346 (-)
Type: TC
Location: 6579 - 7346 (-)
Gene ID: k141_25078_7
Type: TC
Location: 7346 - 8329 (-)
Type: TC
Location: 7346 - 8329 (-)
Gene ID: k141_25078_8
Type: TC
Location: 8329 - 9318 (-)
Type: TC
Location: 8329 - 9318 (-)
Gene ID: k141_25078_9
Type: TC
Location: 9318 - 10208 (-)
Type: TC
Location: 9318 - 10208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Y
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_25078_8 | vegan > omnivore | 1.05409 | 0.00924 |
| k141_25078_8 | vegetarian > omnivore | 1.93535 | 0.00573 |
| k141_25078_9 | vegetarian > omnivore | 1.30015 | 0.00573 |