Cluster: GH192_76_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: GH192_76
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_74623 | k141_74623_4 | 3202 | 4257 | + | GT9 |
| pfam | k141_74623 | k141_74623_5 | 4328 | 4672 | - | CMD |
| TF | k141_74623 | k141_74623_6 | 4776 | 5666 | + | HTH_AraC | HTH_AraC |
| TC | k141_74623 | k141_74623_7 | 5743 | 7587 | + | 3.A.1.106.2 |
Gene ID: k141_74623_4
Type: CAZyme
Location: 3202 - 4257 (+)
Type: CAZyme
Location: 3202 - 4257 (+)
Gene ID: k141_74623_5
Type: pfam
Location: 4328 - 4672 (-)
Type: pfam
Location: 4328 - 4672 (-)
Gene ID: k141_74623_6
Type: TF
Location: 4776 - 5666 (+)
Type: TF
Location: 4776 - 5666 (+)
Gene ID: k141_74623_7
Type: TC
Location: 5743 - 7587 (+)
Type: TC
Location: 5743 - 7587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Y
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_74623_4 | vegetarian > vegan | 1.16636 | 0.03622 |
| k141_74623_5 | vegan > omnivore | 1.44985 | 0.00924 |
| k141_74623_5 | vegetarian > omnivore | 1.14271 | 0.00573 |
| k141_74623_6 | vegetarian > vegan | 1.09441 | 0.03622 |
| k141_74623_7 | vegetarian > vegan | 1.92152 | 0.03622 |