Cluster: GH192_76_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: GH192_76
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_248749 | k141_248749_9 | 8445 | 9572 | + | GH102 |
| TC | k141_248749 | k141_248749_10 | 9572 | 10333 | + | 3.A.16.1.3 |
| TC | k141_248749 | k141_248749_11 | 10502 | 11488 | + | 3.A.1.15.5 |
| pfam | k141_248749 | k141_248749_12 | 11607 | 13742 | + | UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st |
| TC | k141_248749 | k141_248749_13 | 13779 | 15683 | - | 2.A.37.1.2 |
Gene ID: k141_248749_9
Type: CAZyme
Location: 8445 - 9572 (+)
Type: CAZyme
Location: 8445 - 9572 (+)
Gene ID: k141_248749_10
Type: TC
Location: 9572 - 10333 (+)
Type: TC
Location: 9572 - 10333 (+)
Gene ID: k141_248749_11
Type: TC
Location: 10502 - 11488 (+)
Type: TC
Location: 10502 - 11488 (+)
Gene ID: k141_248749_12
Type: pfam
Location: 11607 - 13742 (+)
Type: pfam
Location: 11607 - 13742 (+)
Gene ID: k141_248749_13
Type: TC
Location: 13779 - 15683 (-)
Type: TC
Location: 13779 - 15683 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Y
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_248749_10 | vegan > omnivore | 1.52863 | 0.00924 |
| k141_248749_10 | vegetarian > omnivore | 1.22469 | 0.00573 |
| k141_248749_11 | vegan > omnivore | 1.57404 | 0.00924 |
| k141_248749_12 | vegan > omnivore | 1.28421 | 0.00924 |
| k141_248749_12 | vegetarian > omnivore | 1.25268 | 0.00573 |