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Cluster: GH192_76_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_161541 k141_161541_1 1 1281 - 2.A.47.5.2
TC k141_161541 k141_161541_2 1437 2663 - 2.A.1.12.1
TF k141_161541 k141_161541_3 2838 3548 + GntR
pfam k141_161541 k141_161541_4 3538 4611 + GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
CAZyme k141_161541 k141_161541_5 4622 5728 + GH177
NULL(UNKNOWN) k141_161541 k141_161541_6 5808 6362 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_161541 k141_161541_7 6427 7059 - PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
TC k141_161541 k141_161541_8 7126 8772 - 3.A.1.5.27
TC k141_161541 k141_161541_9 8906 10315 - 2.A.1.3.51
Gene ID: k141_161541_1
Type: TC
Location: 1 - 1281 (-)
Gene ID: k141_161541_2
Type: TC
Location: 1437 - 2663 (-)
Gene ID: k141_161541_3
Type: TF
Location: 2838 - 3548 (+)
Gene ID: k141_161541_4
Type: pfam
Location: 3538 - 4611 (+)
Gene ID: k141_161541_5
Type: CAZyme
Location: 4622 - 5728 (+)
Gene ID: k141_161541_6
Type:
Location: 5808 - 6362 (+)
Gene ID: k141_161541_7
Type: pfam
Location: 6427 - 7059 (-)
Gene ID: k141_161541_8
Type: TC
Location: 7126 - 8772 (-)
Gene ID: k141_161541_9
Type: TC
Location: 8906 - 10315 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_161541_7 vegetarian > omnivore 1.45995 0.00573
k141_161541_7 vegetarian > vegan 1.04963 0.03622
k141_161541_8 vegan > omnivore 1.57202 0.00924

🧭 Explore Read Mapping of CGC

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