Cluster: GH192_76_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: GH192_76
- CGC Family ID: CGCFAM_01473
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_25609 | k141_25609_1 | 2 | 457 | - | 3.A.1.122.12 |
| pfam | k141_25609 | k141_25609_2 | 681 | 2354 | + | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| pfam | k141_25609 | k141_25609_3 | 2421 | 2861 | + | CxxCxxCC |
| CAZyme | k141_25609 | k141_25609_4 | 3006 | 5096 | + | GH77 |
| CAZyme | k141_25609 | k141_25609_5 | 5108 | 6478 | + | CBM48 | GH13_9 |
Gene ID: k141_25609_1
Type: TC
Location: 2 - 457 (-)
Type: TC
Location: 2 - 457 (-)
Gene ID: k141_25609_2
Type: pfam
Location: 681 - 2354 (+)
Type: pfam
Location: 681 - 2354 (+)
Gene ID: k141_25609_3
Type: pfam
Location: 2421 - 2861 (+)
Type: pfam
Location: 2421 - 2861 (+)
Gene ID: k141_25609_4
Type: CAZyme
Location: 3006 - 5096 (+)
Type: CAZyme
Location: 3006 - 5096 (+)
Gene ID: k141_25609_5
Type: CAZyme
Location: 5108 - 6478 (+)
Type: CAZyme
Location: 5108 - 6478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_Y
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_25609_3 | vegetarian > vegan | 1.06400 | 0.03622 |